STRINGSTRING
RSAG_03387 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03387" - Xylulokinase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03387Xylulokinase (485 aa)    
Predicted Functional Partners:
RSAG_03386
Uncharacterized protein (493 aa)
 
 
  0.949
RSAG_03186
L-ribulose-5-phosphate 4-epimerase (230 aa)
       
  0.861
RSAG_01948
Chlorophyll synthesis pathway, bchC (338 aa)
 
 
  0.854
RSAG_02380
Ribulose-phosphate 3-epimerase (223 aa)
 
   
  0.833
fucI
6-deoxy-L-galactose isomerase ; Converts the aldose L-fucose into the corresponding ketose L-fuculose (598 aa)
   
 
  0.831
RSAG_02285
Chlorophyll synthesis pathway, bchC (342 aa)
   
 
  0.830
RSAG_00662
Uncharacterized protein (339 aa)
   
 
  0.830
RSAG_01778
L-ribulose-5-phosphate 4-epimerase (287 aa)
     
  0.829
RSAG_01776
Uncharacterized protein (389 aa)
   
 
  0.825
RSAG_02213
Uncharacterized protein (538 aa)
 
 
  0.815
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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