STRINGSTRING
RSAG_03391 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03391" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03391Uncharacterized protein (503 aa)    
Predicted Functional Partners:
RSAG_03392
Spermidine synthase (286 aa)
 
   
  0.992
RSAG_03393
Uncharacterized protein (426 aa)
 
   
  0.980
RSAG_03394
Carboxynorspermidine decarboxylase (373 aa)
 
   
  0.977
aguA
Agmatine iminohydrolase (367 aa)
 
   
  0.942
RSAG_03396
N-carbamoylputrescine amidase (292 aa)
 
   
  0.846
RSAG_01234
Diaminopimelate decarboxylase (426 aa)
 
   
  0.792
argH
Arginosuccinase (459 aa)
         
  0.672
RSAG_01984
Uncharacterized protein (269 aa)
       
  0.656
RSAG_02565
Acetylornithine aminotransferase (405 aa)
   
 
  0.646
RSAG_02184
Acetylornithine aminotransferase (396 aa)
   
 
  0.646
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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