STRINGSTRING
RSAG_03397 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03397" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03397Uncharacterized protein (153 aa)    
Predicted Functional Partners:
RSAG_00524
TIGR04097 family integral membrane protein (116 aa)
   
          0.742
RSAG_00769
Stage III sporulation protein AB (172 aa)
   
          0.670
RSAG_03121
Uncharacterized protein (484 aa)
   
          0.662
RSAG_02111
Uncharacterized protein (304 aa)
   
          0.654
RSAG_02656
Uncharacterized protein (813 aa)
   
          0.649
RSAG_03122
Uncharacterized protein (488 aa)
   
          0.638
RSAG_02464
Uncharacterized protein (145 aa)
   
          0.602
RSAG_01849
Uncharacterized protein (289 aa)
   
          0.598
RSAG_02386
Uncharacterized protein (170 aa)
   
          0.591
RSAG_02677
Uncharacterized protein (329 aa)
   
          0.560
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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