STRINGSTRING
RSAG_03411 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03411" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03411Uncharacterized protein (455 aa)    
Predicted Functional Partners:
RSAG_03409
Uncharacterized protein (278 aa)
              0.864
RSAG_03408
Uncharacterized protein (291 aa)
              0.863
RSAG_03410
Uncharacterized protein (536 aa)
              0.859
RSAG_03412
Uncharacterized protein (291 aa)
              0.728
RSAG_03407
Uncharacterized protein (437 aa)
 
          0.694
RSAG_03495
Uncharacterized protein (452 aa)
   
          0.568
RSAG_02253
Uncharacterized protein (436 aa)
   
          0.568
RSAG_01846
Uncharacterized protein (435 aa)
   
          0.509
RSAG_02078
Uncharacterized protein (1039 aa)
 
          0.476
RSAG_01534
Uncharacterized protein (436 aa)
   
          0.472
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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