STRINGSTRING
RSAG_03418 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03418" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03418Uncharacterized protein (106 aa)    
Predicted Functional Partners:
RSAG_03417
Uncharacterized protein (563 aa)
 
   
0.925
RSAG_03419
Thioredoxin (101 aa)
   
 
  0.864
RSAG_01331
Uncharacterized protein (1053 aa)
       
      0.860
RSAG_00685
Uncharacterized protein (831 aa)
       
      0.860
RSAG_02939
Uncharacterized protein (384 aa)
   
  0.713
iscS
Cysteine desulfurase IscS ; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins (394 aa)
   
  0.713
RSAG_01570
Thiazole biosynthesis adenylyltransferase ThiF (278 aa)
   
 
  0.655
RSAG_02352
Cysteine synthase (309 aa)
   
 
  0.650
pyrK
Dihydroorotate oxidase B, electron transfer subunit ; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+) (262 aa)
     
    0.646
RSAG_00640
Uncharacterized protein (295 aa)
     
    0.646
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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