STRINGSTRING
RSAG_03469 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03469" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03469Uncharacterized protein (116 aa)    
Predicted Functional Partners:
RSAG_00227
Diguanylate cyclase (GGDEF) domain-containing protein (659 aa)
 
          0.868
RSAG_03468
HAD hydrolase, family IA (218 aa)
              0.859
RSAG_02258
Uncharacterized protein (383 aa)
 
          0.789
RSAG_04618
Uncharacterized protein (985 aa)
 
          0.750
RSAG_02930
Uncharacterized protein (927 aa)
 
          0.724
RSAG_00852
Uncharacterized protein (686 aa)
 
          0.703
RSAG_01683
Diguanylate cyclase (GGDEF) domain-containing protein (855 aa)
 
          0.700
RSAG_00896
Uncharacterized protein (955 aa)
 
          0.673
RSAG_03422
Diguanylate cyclase (GGDEF) domain-containing protein (349 aa)
 
          0.654
RSAG_01578
Uncharacterized protein (110 aa)
   
          0.641
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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