STRINGSTRING
RSAG_03479 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03479" - Cytidine deaminase in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03479Cytidine deaminase (147 aa)    
Predicted Functional Partners:
RSAG_03480
Uridine phosphorylase ; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (261 aa)
 
 
  0.967
RSAG_03070
Uncharacterized protein (555 aa)
   
 
  0.900
deoB
Phosphodeoxyribomutase ; Phosphotransfer between the C1 and C5 carbon atoms of pentose (396 aa)
 
   
  0.897
deoD
Purine nucleoside phosphorylase DeoD-type (234 aa)
 
   
  0.873
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (164 aa)
            0.844
upp
UPRTase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (209 aa)
 
 
  0.837
RSAG_02090
Uncharacterized protein (329 aa)
   
 
    0.755
RSAG_02923
Uncharacterized protein (652 aa)
   
 
    0.689
RSAG_01705
HAD hydrolase, family IA (221 aa)
 
        0.680
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
         
  0.648
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (7%) [HD]