STRINGSTRING
RSAG_03481 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03481" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03481Uncharacterized protein (154 aa)    
Predicted Functional Partners:
RSAG_02493
Uncharacterized protein (260 aa)
   
          0.497
RSAG_02497
MATE efflux family protein (455 aa)
 
          0.470
RSAG_00321
Uncharacterized protein (329 aa)
   
          0.460
RSAG_01439
Uncharacterized protein (881 aa)
   
          0.433
RSAG_03480
Uridine phosphorylase ; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (261 aa)
              0.431
RSAG_00442
Uncharacterized protein (783 aa)
   
          0.427
RSAG_03479
Cytidine deaminase (147 aa)
              0.408
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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