STRINGSTRING
RSAG_03513 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_03513" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_03513Uncharacterized protein (126 aa)    
Predicted Functional Partners:
RSAG_03000
Uncharacterized protein (255 aa)
 
  0.975
RSAG_03001
Uncharacterized protein (264 aa)
 
 
  0.949
RSAG_00604
Uncharacterized protein (195 aa)
   
 
  0.889
RSAG_02013
Phosphomethylpyrimidine kinase (269 aa)
   
 
  0.773
RSAG_00766
Stage III sporulation protein AE (409 aa)
   
          0.699
RSAG_04772
Uncharacterized protein (204 aa)
   
          0.650
RSAG_02837
Uncharacterized protein (139 aa)
   
          0.623
RSAG_02834
Stage V sporulation protein AE (118 aa)
   
          0.594
RSAG_00770
Stage III sporulation protein AA (312 aa)
   
          0.587
RSAG_00641
Uncharacterized protein (234 aa)
   
          0.566
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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