STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22736.1Sel1 repeat superfamily protein. (134 aa)    
Predicted Functional Partners:
EFL21497.1
Putative sporulation protein K.
   
 0.724
EFL21758.1
ATPase; Truncated CDS; unextendable partial coding region.
   
 0.724
EFL23849.1
AAA family ATPase.
   
 0.724
EFL23850.1
Putative AAA family ATPase.
   
 0.724
EFL26185.1
Cell division cycle protein; Belongs to the AAA ATPase family.
   
 0.724
EFL27290.1
Putative ATPase; Truncated CDS; unextendable partial coding region.
   
 0.724
EFL29137.1
AAA family ATPase.
   
 0.724
EFL29212.1
Stage V sporulation protein K.
   
 0.724
EFL22737.1
Conserved hypothetical protein.
       0.538
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
    
 0.491
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.