STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23759.1Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
EFL23562.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
  
 
 0.931
EFL23558.1
Putative integral membrane protein.
  
 
 0.915
EFL23559.1
Putative integral membrane protein.
  
 
 0.816
EFL24950.1
Putative integral membrane protein.
  
 
 0.816
EFL24951.1
Putative integral membrane protein.
  
 
 0.816
EFL23561.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
  
  
 0.788
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.782
EFL23898.1
Putative tetratricopeptide repeat protein.
  
 
 0.781
EFL23560.1
Type II/IV secretion system protein.
  
 
 0.768
EFL24949.1
Type II/IV secretion system protein.
  
 
 0.768
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.