STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24785.1Integrase; Unextendable partial coding region; Belongs to the 'phage' integrase family. (366 aa)    
Predicted Functional Partners:
EFL23140.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.696
EFL23062.1
Putative toxin-antitoxin system, toxin component.
  
     0.638
EFL24787.1
Putative hydrolase, NUDIX family.
 
     0.601
EFL21914.1
Conserved hypothetical protein.
  
     0.583
EFL21672.1
Putative toxin-antitoxin system, toxin component.
  
     0.566
EFL24786.1
Conserved hypothetical protein.
       0.539
EFL22324.1
Conserved hypothetical protein.
  
     0.534
EFL23115.1
Conserved hypothetical protein.
  
     0.511
EFL22753.1
RecQ family ATP-dependent DNA helicase; Truncated CDS.
  
  
 0.500
EFL24784.1
HTH_3 family transcriptional regulator.
     
 0.496
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.