STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB84423.1Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; KEGG: amt:Amet_4066 stage II sporulation E family protein. (389 aa)    
Predicted Functional Partners:
ACB84424.1
KEGG: amt:Amet_4067 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein.
 
     0.955
ACB84422.1
KEGG: amt:Amet_4065 hypothetical protein.
 
    0.945
ACB85488.1
TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: ckl:CKL_1636 ThiH.
   
  
 0.934
ACB86379.1
Rod binding protein-like protein; KEGG: tte:TTE0174 flagellum-specific muramidase.
   
    0.933
ACB83691.1
PFAM: ATP-binding region ATPase domain protein; KEGG: tte:TTE0886 anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 
 0.855
ACB84421.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cpe:CPE2575 probable hydrogenase.
 
     0.834
spoIIAB
Putative anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
 
 0.784
ACB84988.1
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: hmo:HM1_2233 flagellar motor switch protein FliM.
  
    0.738
ACB84975.1
PFAM: flagellar motor switch protein FliG; KEGG: gtn:GTNG_1073 flagellar motor switch protein.
  
    0.736
ACB84971.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.713
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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