STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB85338.1PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_2080 nucleoside recognition domain protein. (415 aa)    
Predicted Functional Partners:
ACB84779.1
TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: drm:Dred_2486 protein of unknown function DUF1429.
 
   
 0.809
ACB84780.1
TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: amt:Amet_3034 putative stage IV sporulation YqfD.
 
   
 0.801
ACB83671.1
TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: oih:OB0068 hypothetical protein.
  
   
 0.789
ACB86416.1
Hypothetical protein; KEGG: cdf:CD3564 stage II sporulation protein.
  
   
 0.782
ACB85283.1
TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; KEGG: drm:Dred_1060 hypothetical protein.
  
    0.779
ACB85245.1
TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: gtn:GTNG_2249 stage II sporulation protein M.
  
   
 0.778
ACB86383.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: hmo:HM1_1113 stage III sporulation protein D.
  
  
 0.775
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.774
ACB85284.1
TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative.
  
     0.773
ACB83677.1
KEGG: amt:Amet_0173 sporulation stage II, protein E; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
  
     0.770
Your Current Organism:
Natranaerobius thermophilus
NCBI taxonomy Id: 457570
Other names: N. thermophilus JW/NM-WN-LF, Natranaerobius thermophilus JW/NM-WN-LF, Natranaerobius thermophilus str. JW/NM-WN-LF, Natranaerobius thermophilus strain JW/NM-WN-LF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.