STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5P15Histone-like transcription factor and archaeal histone family protein. (203 aa)    
Predicted Functional Partners:
CADR16
DNA polymerase epsilon subunit 3.
    
 0.906
C0PNR4_MAIZE
Nuclear transcription factor Y subunit A-10.
  
 
 0.716
A0A1D6HLV3
Nuclear transcription factor Y subunit A-3.
  
 
 0.715
B4F9M3_MAIZE
Nuclear transcription factor Y subunit A-10.
  
 
 0.715
B4FIN9_MAIZE
CCAAT-HAP2-transcription factor 26.
  
 
 0.709
B4FNM1_MAIZE
Nuclear transcription factor Y subunit A-8.
  
 
 0.703
B4FHR0_MAIZE
Nuclear transcription factor Y subunit A-3.
  
 
 0.702
A0A1D6F9G6
Nuclear transcription factor Y subunit A-10.
  
 
 0.680
A0A1D6FS52
Nuclear transcription factor Y subunit B-8.
   
 0.678
A0A1D6M656
NF-YB-like protein.
   
 0.678
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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