STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl866_1aPolyadenylate-binding protein RBP45C. (543 aa)    
Predicted Functional Partners:
A0A1D6GMD7
Protein FATTY ACID EXPORT 5.
      
 0.855
A0A1D6GU46
Cytochrome P450 family 718; Belongs to the cytochrome P450 family.
    
 
 0.855
A0A1D6KW33
Protein FATTY ACID EXPORT 5.
      
 0.855
A0A1D6H7J8
UDP-glycosyltransferase 73C5.
      
 0.854
A0A1D6H931
Serine/threonine-protein kinase PBS1.
   
 0.786
B4F839_MAIZE
Receptor-like kinase LIP2.
   
 0.786
B6SVK8_MAIZE
Serine/threonine-protein kinase PBS1; Belongs to the protein kinase superfamily.
   
 0.784
Si606018d05
Serine/threonine-protein kinase PBS1.
   
 0.780
A0A1D6JVU0
3-ketoacyl-CoA synthase.
      
 0.661
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
    
 0.554
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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