STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6FM73Cactin. (67 aa)    
Predicted Functional Partners:
B4FUX9_MAIZE
Uncharacterized protein.
     
 0.752
A0A1D6GIN3
Initiation factor eIF-4 gamma MA3.
   
 
  0.670
A0A1D6IW19
MIF4G domain-containing protein / MA3 domain-containing protein.
   
 
  0.670
A0A1D6K580
Transducin/WD40 repeat-like superfamily protein.
   
 
 0.668
Pco114009a
Pre-mRNA-splicing factor PRP17.
   
 
 0.668
K7VKY1_MAIZE
Transducin/WD40 repeat-like superfamily protein.
   
 
 0.668
B4F9V3_MAIZE
Nkap_C domain-containing protein.
   
 
  0.640
C4J233_MAIZE
DEAD-box ATP-dependent RNA helicase 35.
     
 0.631
Cl19935_1b
UPF0235 protein.
   
  0.605
A0A1D6JS45
Peptidyl-prolyl cis-trans isomerase CYP65.
   
 
  0.533
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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