STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6KR25Zinc finger CCCH domain-containing protein 19. (684 aa)    
Predicted Functional Partners:
A0A1D6FUW7
Chromatin structure-remodeling complex protein BSH.
   
 0.820
K7U2S6_MAIZE
Chaperone DnaJ-domain superfamily protein.
   
 0.820
IDP701
Eukaryotic translation initiation factor NCBP; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.696
Umc1614
Chromatin structure-remodeling complex protein SYD.
    
 0.674
A0A1D6NSH0
Transcription elongation factor SPT5.
  
  
  0.626
A0A1D6LUW6
Transcription elongation factor SPT5.
  
  
  0.625
C0P8W9_MAIZE
High mobility group B protein 15.
   
 
 0.617
A0A1D6M795
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 
  0.610
Umc1473
Protein RTF1-like protein.
   
 
  0.608
B7ZX72_MAIZE
Protein RTF1-like protein.
   
 
  0.608
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.