STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl340_1Carbon catabolite repressor protein 4 homolog 4. (411 aa)    
Predicted Functional Partners:
A0A1D6GLB0
Transcription regulator NOT2/NOT3/NOT5 family protein.
    
 0.908
A0A1D6KZB5
Transcription regulator NOT2/NOT3/NOT5 family protein.
    
 0.908
Umc1463
Putative NOT transcription complex subunit VIP2.
    
 0.908
Pco062058
Putative NOT transcription complex subunit VIP2.
    
 0.908
A0A1D6HB10
Thioredoxin-like 2.
    
 0.866
Rcd1L4
Cell differentiation Rcd1-like protein.
    
 0.821
A0A1D6IXP1
FBD domain-containing protein.
    
 0.821
A0A1D6LSN8
Uncharacterized protein.
    
 0.821
A0A1D6P4F0
Uncharacterized protein.
    
 0.821
Rcd1L1
Cell differentiation Rcd1-like protein.
    
 0.821
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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