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pco092990a protein (Zea mays) - STRING interaction network
"pco092990a" - LOC100283956 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco092990aLOC100283956 (428 aa)    
Predicted Functional Partners:
GRMZM2G003953_P02
Putative peptidase C48 domain family protein (862 aa)
       
  0.568
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
         
  0.533
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
         
  0.533
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
         
  0.533
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
         
  0.533
GRMZM2G003663_P01
Kelch motif family protein (408 aa)
           
  0.526
GRMZM2G310283_P01
Hypothetical protein LOC100280438 (LOC100280438), mRNA (1251 aa)
     
 
    0.513
GRMZM5G853245_P03
Nucleic acid binding protein (370 aa)
         
  0.503
c3h47
Zinc finger CCCH domain-containing protein 2-like (378 aa)
         
  0.503
GRMZM2G382632_P01
Hypothetical protein LOC100384626 (402 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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