STRINGSTRING
pco070877 protein (Zea mays) - STRING interaction network
"pco070877" - LOC100283816 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco070877LOC100283816 (127 aa)    
Predicted Functional Partners:
Zm.141746
Uncharacterized protein (337 aa)
     
 
  0.966
Zm.3442
Uncharacterized protein (258 aa)
     
 
  0.966
GRMZM2G067883_P01
Uncharacterized protein (120 aa)
       
 
  0.893
GRMZM2G062044_P01
Cytochrome b559 subunit alpha (PSII reaction center subunit V) (83 aa)
       
 
  0.892
Zm.142568
ultraviolet-B-repressible protein (122 aa)
     
 
  0.880
psb29
Photosystem II subunit29 (291 aa)
     
      0.781
GRMZM2G092311_P02
Chlorophyll a-b binding protein 6A (273 aa)
     
   
  0.705
GRMZM2G036880_P01
Chlorophyll a-b binding protein 6A (249 aa)
     
   
  0.705
GRMZM2G085646_P01
Photosystem I reaction center subunit III, chloroplastic-like (232 aa)
     
   
  0.694
Zm.67341
Photosystem I reaction center subunit III (225 aa)
     
   
  0.694
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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