STRINGSTRING
Zm.88065 protein (Zea mays) - STRING interaction network
"Zm.88065" - Putative geranylgeranyl pyrophosphate synthase 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.88065Putative geranylgeranyl pyrophosphate synthase 1 (367 aa)    
Predicted Functional Partners:
ippi2
Putative uncharacterized protein (296 aa)
   
 
  0.966
umc1301
LOC541901 (219 aa)
   
 
  0.966
pco077228
Geranylgeranyl hydrogenase (457 aa)
   
  0.964
GRMZM2G093146_P01
Putative uncharacterized protein (412 aa)
   
  0.963
GRMZM2G146437_P01
Undecaprenyl pyrophosphate synthetase (287 aa)
   
  0.958
GRMZM2G058173_P01
Undecaprenyl pyrophosphate synthetase (313 aa)
   
  0.958
Zm.158290
Undecaprenyl pyrophosphate synthetase (306 aa)
   
  0.958
pco074498b
Hypothetical protein LOC100272584 (419 aa)
       
  0.953
FPS
Farnesyl pyrophosphate synthase (FPP synthase)(FPS)(Farnesyl diphosphate synthase) [Includes Dimethylallyltranstransferase(EC 2.5.1.1);Geranyltranstransferase(EC 2.5.1.10)]; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (350 aa)
         
  0.950
GRMZM2G147721_P01
Hypothetical protein LOC100192004 (355 aa)
         
  0.950
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]