STRINGSTRING
pco130567 protein (Zea mays) - STRING interaction network
"pco130567" - LOC778427 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco130567LOC778427 (371 aa)    
Predicted Functional Partners:
CYP88A1
Cytochrome P450 88A1 (EC 1.14.-.-)(Dwarf3 protein) (519 aa)
       
  0.970
Zm.103202
Gibberellin 2-beta-dioxygenase 7 (362 aa)
   
   
0.921
D1
GA 3-oxidase 1 (382 aa)
   
   
0.921
Zm.23033
Gibberellin 2-oxidase (366 aa)
   
   
0.917
Zm.25436
Gibberellin 2-beta-dioxygenase (LOC100284370), mRNA (477 aa)
   
   
 
0.914
Zm.158772
Gibberellin 2-beta-dioxygenase (334 aa)
   
   
 
0.913
GRMZM2G044358_P03
Hypothetical protein LOC100280117 (380 aa)
   
   
 
0.911
pzb00414
Gibberellin 2-beta-dioxygenase (333 aa)
   
   
 
0.910
Zm.30825
Hypothetical protein LOC100192514 (432 aa)
         
    0.900
GRMZM2G021051_P01
Hypothetical protein LOC100217010 (368 aa)
   
   
 
0.804
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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