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cfm6 protein (Zea mays) - STRING interaction network
"cfm6" - RNA-binding CRS1 / YhbY in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfm6RNA-binding CRS1 / YhbY (CRM) domain protein; CFM6; Uncharacterized protein (338 aa)    
Predicted Functional Partners:
100501177
DEAD-box ATP-dependent RNA helicase 32; Belongs to the DEAD box helicase family (746 aa)
     
   
  0.715
100217155
Polynucleotidyl transferase ribonuclease H-like superfamily protein (174 aa)
           
  0.714
100285395
Pentatricopeptide repeat-containing protein mitochondrial; Tetratricopeptide-like helical; Uncharacterized protein (501 aa)
           
  0.714
100191497
Protein NUCLEAR FUSION DEFECTIVE 5 mitochondrial (673 aa)
           
  0.714
100279356
NOL1/NOP2/sun family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (585 aa)
     
   
  0.709
100273462
Pentatricopeptide repeat-containing protein mitochondrial (393 aa)
           
  0.687
100283443
Steroid reductase DET2 (262 aa)
           
  0.682
GRMZM2G054537_P01
DAG protein (246 aa)
           
  0.597
mus2
MutS homolog2; MUS2 protein (1184 aa)
     
   
  0.596
100283773
Pseudouridine synthase family protein (565 aa)
     
   
  0.585
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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