STRINGSTRING
ZCN20 protein (Zea mays) - STRING interaction network
ZCN20 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCN20ZCN20 (175 aa)    
Predicted Functional Partners:
Zm.84814
LOC100280943 (293 aa)
     
    0.963
GRMZM2G112865_P01
LOC100284384 (161 aa)
     
    0.959
GRMZM2G108643_P01
Hypothetical protein LOC100274150 (209 aa)
     
    0.959
magi94754
Hypothetical protein LOC100279464 (244 aa)
     
    0.958
GRMZM2G436038_P01
Annotation not available (340 aa)
     
    0.957
GRMZM2G101494_P01
Annotation not available (91 aa)
     
    0.957
GRMZM2G048557_P01
39S ribosomal protein L47 (138 aa)
     
    0.957
pco061453
LOC100282534 (226 aa)
     
    0.954
GRMZM2G109165_P01
Hypothetical protein LOC100193892 (262 aa)
     
  0.954
GRMZM2G049416_P01
Hypothetical protein LOC100191826 (318 aa)
     
  0.954
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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