• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
100280567 protein (Zea mays) - STRING interaction network
"100280567" - tRNA pseudouridine synthase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100280567tRNA pseudouridine synthase (443 aa)    
Predicted Functional Partners:
100282303
26S proteasome non-ATPase regulatory subunit 6; Uncharacterized protein (389 aa)
           
  0.872
100217137
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (386 aa)
   
   
  0.826
TIDP3431
26S proteasome non-ATPase regulatory subunit 6; Uncharacterized protein (388 aa)
           
  0.756
GRMZM2G151200_P01
RNA pseudouridine synthase 2 chloroplastic; RNA binding protein; Uncharacterized protein (419 aa)
   
   
  0.727
100191171
Pantoate--beta-alanine ligase (323 aa)
 
   
  0.646
GRMZM2G121460_P01
annotation not available (308 aa)
   
 
  0.617
103644011
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (501 aa)
   
 
  0.617
cl34483_1a
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (501 aa)
   
 
  0.617
100383540
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (607 aa)
     
 
  0.604
GNAT16
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (570 aa)
     
 
  0.604
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]