STRINGSTRING
Zm.74300 protein (Zea mays) - STRING interaction network
"Zm.74300" - Prohibitin4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.74300Prohibitin4 (289 aa)    
Predicted Functional Partners:
Zm.496
Prohibitin3 (289 aa)
   
 
0.997
PHB2
Prohibitin2 (284 aa)
   
 
0.997
Zm.84814
LOC100280943 (293 aa)
     
 
  0.889
mads52
Putative MADS-box transcription factor family protein (259 aa)
     
 
  0.884
cl31945_1
Hypothetical protein LOC100193036 (474 aa)
     
 
  0.873
GRMZM2G466519_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (209 aa)
   
 
  0.864
GRMZM2G700121_P03
Uncharacterized LOC103634040 (812 aa)
     
 
  0.825
GRMZM2G456312_P01
Annotation not available (895 aa)
     
 
  0.825
GRMZM2G385424_P01
Annotation not available (691 aa)
     
 
  0.825
Zm.78014
ATP-dependent zinc metalloprotease FtsH (577 aa)
     
 
  0.825
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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