STRINGSTRING
AC225555.3_FGP005 protein (Zea mays) - STRING interaction network
"AC225555.3_FGP005" - Uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AC225555.3_FGP005Uncharacterized protein (374 aa)    
Predicted Functional Partners:
Zm.36547
OB-fold nucleic acid binding domain containing protein (165 aa)
       
 
  0.929
GRMZM5G857930_P05
Hypothetical protein LOC100273602 (482 aa)
       
 
  0.623
pco136451a
Hypothetical protein LOC100273977 (481 aa)
       
 
  0.623
TERT
Telomerase reverse transcriptase catalytic subunit (1188 aa)
           
  0.495
SMH5
Single myb histone 5 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (286 aa)
           
  0.431
SMH1
Hypothetical protein LOC100274000 ; Binds preferentially double-stranded telomeric repeats 5’-TTTAGGG-3’, but can also bind to the single G-rich and C-rich telomeric strand (299 aa)
           
  0.431
SMH6
Single myb histone 6 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (317 aa)
           
  0.431
SMH2
Hypothetical protein LOC100273130 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (298 aa)
           
  0.431
PARP1
Poly [ADP-ribose] polymerase 1 (PARP-1)(EC 2.4.2.30)(NAD(+) ADP-ribosyltransferase 1)(ADPRT-1)(Poly[ADP-ribose] synthase 1); Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity) (980 aa)
           
  0.414
Zm.155493
Uncharacterized protein (579 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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