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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
cap4 protein (Zea mays) - STRING interaction network
"cap4" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cap4annotation not available (884 aa)    
Predicted Functional Partners:
103635403
Protein ABIL1 (298 aa)
     
   
  0.913
103651034
annotation not available (406 aa)
         
  0.838
phm3342
Protein ABIL1 (418 aa)
     
   
  0.829
GRMZM2G136960_P01
2-Sep (190 aa)
           
  0.776
TIDP3622
Potassium transporter; Potassium transporter (852 aa)
           
  0.720
103641531
Amine oxidase (744 aa)
           
  0.645
100281026
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (141 aa)
           
  0.615
100280460
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (136 aa)
           
  0.615
GRMZM2G411916_P01
annotation not available (412 aa)
   
     
  0.604
ARF7
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (686 aa)
           
  0.595
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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