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ra2 protein (Zea mays) - STRING interaction network
"ra2" - Ramosa 2 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ra2Ramosa 2 (261 aa)    
Predicted Functional Partners:
Ra1
Hypothetical protein LOC100276104 (175 aa)
           
  0.830
RS2
Protein rough sheath 2 (Protein PHANTASTICA)(ZmPHAN); Transcription factor required for normal cell differentiation. Interacts directly with asymmetric leaves 2 (AS2) to repress the knox homeobox genes (370 aa)
       
 
  0.768
BA1
Barren stalk1 (219 aa)
           
  0.721
rel2
Hypothetical protein LOC100381576 (1141 aa)
           
  0.721
ra3
Ramosa3 ; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (366 aa)
           
  0.721
Zm.90729
GATA transcription factor 19 (284 aa)
           
  0.720
KN-1
Homeotic protein knotted-1 ; Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5’-TGAC-3’ (359 aa)
           
  0.719
bif2
Uncharacterized protein (460 aa)
           
  0.713
bd1
Branched silkless1 (315 aa)
           
  0.710
TD1
Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1; Receptor-like kinase protein that regulates meristem size during inflorescence and flower development. Promotes vegetative meristem growth and restricts inflorescence and floral meristem growth. Based on additive and synergistic phenotypes of double mutants, it is probable that unlike CLV1 and CLV2 in A.thaliana, TD1 and FAE2 do not function exclusively in a single pathway. However, KN-1 and TD1 do function in a linear pathway to maintain vegetative meristem homeostasis, but they may interact with different partners [...] (996 aa)
           
  0.626
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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