STRINGSTRING
csu240 protein (Zea mays) - STRING interaction network
"csu240" - LOC100285550 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csu240LOC100285550 (487 aa)    
Predicted Functional Partners:
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
         
  0.560
Zm.80133
Putative uncharacterized protein (717 aa)
         
  0.538
Zm.4019
LOC100280719 (731 aa)
         
  0.538
AC203754.4_FGP008
Uncharacterized protein (545 aa)
         
  0.538
GRMZM2G466519_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (209 aa)
         
  0.531
GRMZM2G436038_P01
Annotation not available (340 aa)
           
  0.511
GRMZM2G136892_P01
Annotation not available (451 aa)
         
  0.487
GRMZM2G112499_P01
Annotation not available (442 aa)
         
  0.487
Zm.99045
Putative serine/threonine-protein kinase-like protein CCR3 (453 aa)
     
 
  0.468
GRMZM2G428201_P01
Uncharacterized protein (383 aa)
     
 
  0.468
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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