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STRINGSTRING
LOB7 protein (Zea mays) - STRING interaction network
"LOB7" - LOB domain-containing protein 42 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOB7LOB domain-containing protein 42 (283 aa)    
Predicted Functional Partners:
LOB24
Putative LOB domain-containing family protein (413 aa)
           
  0.738
GRMZM2G445999_P01
annotation not available (162 aa)
           
  0.581
103654889
Auxin-responsive protein SAUR71 (126 aa)
           
  0.563
100280994
Photosystem II core complex protein psbY; Photosystem II core complex proteins psbY (191 aa)
           
  0.563
TCP20
Transcription factor TCP11 (315 aa)
           
  0.561
nlp6
annotation not available (916 aa)
           
  0.560
100193471
annotation not available (566 aa)
           
  0.560
myb27
MYB transcription factor; Uncharacterized protein (362 aa)
           
  0.560
tdsgR20H03
CSC1-like protein (796 aa)
           
  0.538
EREB134
Ethylene-responsive transcription factor 2 (229 aa)
           
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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