STRINGSTRING
AY542798.1_FGP003 protein (Zea mays) - STRING interaction network
"AY542798.1_FGP003" - Hypothetical protein LOC100216835 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AY542798.1_FGP003Hypothetical protein LOC100216835 (611 aa)    
Predicted Functional Partners:
Zm.26861
LOC100285191 (766 aa)
     
 
  0.944
GRMZM5G881296_P03
Hypothetical protein LOC100381986 (718 aa)
     
 
  0.943
GRMZM2G126197_P01
Zinc finger CCCH domain-containing protein 45-like (246 aa)
     
 
  0.941
Zm.127137
Zinc finger CCCH domain-containing protein 45-like (251 aa)
     
 
  0.941
GRMZM2G455115_P01
Probable cleavage and polyadenylation specificity factor subunit 1 (573 aa)
     
 
  0.940
GRMZM2G453879_P02
Uncharacterized protein (483 aa)
     
 
  0.940
GRMZM2G154811_P01
Uncharacterized protein (108 aa)
     
 
  0.940
GRMZM2G118697_P01
Uncharacterized protein (153 aa)
     
 
  0.940
GRMZM2G006806_P01
Hypothetical protein LOC100273452 (198 aa)
       
 
  0.936
GRMZM2G445766_P02
Hypothetical protein LOC100278777 (236 aa)
     
 
  0.931
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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