STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4F7W9_MAIZERNA-binding (RRM/RBD/RNP motifs) family protein. (237 aa)    
Predicted Functional Partners:
B6TWD2_MAIZE
AUGMIN subunit 1.
   
 0.931
A0A1D6HUA5
AUGMIN subunit 3.
   
 0.918
A0A1D6LTS3
AUGMIN subunit 3.
   
 0.918
A0A1D6N0T6
SART-1 family protein DOT2.
   
 0.851
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
    
 0.798
Pco134259
USP39 protein.
    
  0.776
A0A096RII5
Splicing factor, arginine/serine-rich 7.
    
  0.768
B4FHA5_MAIZE
Pre-mRNA processing ribonucleoprotein binding region-containing protein.
   
 0.710
B4FLA3_MAIZE
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
  0.677
A0A1D6H388
AUGMIN subunit 6.
    
  0.664
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.