STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl9441_1bVacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (252 aa)    
Predicted Functional Partners:
A0A1D6N918
Vacuolar protein sorting-associated protein 36.
   
 0.993
C0PAX3_MAIZE
Vacuolar protein sorting-associated protein 36.
   
 0.993
B4FJ73_MAIZE
Vacuolar protein sorting-associated protein 20 homolog 2.
    
 0.989
C0PNJ6_MAIZE
Vacuolar protein sorting-associated protein 20 homolog 2.
    
 0.989
A0A096S8J7
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.972
B6TVZ1_MAIZE
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.972
C0HE93_MAIZE
Protein ELC-like.
    
 0.963
K7TNF7_MAIZE
Ubiquitin-conjugating enzyme/RWD-like protein.
    
 0.963
A0A1D6FZB5
Vacuolar protein sorting-associated protein 32 homolog 1.
    
 0.953
A0A1D6L8F6
Vacuolar protein sorting-associated protein 32 homolog 1.
    
 0.953
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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