STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4G076_MAIZEDiaminopimelate decarboxylase 2 chloroplastic; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (412 aa)    
Predicted Functional Partners:
A0A1D6GYS6
Spermine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.994
Pco081586c
Spermine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.994
B4FR86_MAIZE
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family.
  
 0.992
Pco075678
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family.
  
 0.992
Pco077065
Amino_oxidase domain-containing protein.
     
 0.973
A0A1D6DYV6
Lysine-specific histone demethylase 1.
     
 0.973
A0A1D6LP07
Amino_oxidase domain-containing protein.
     
 0.973
K7TNR6_MAIZE
Uncharacterized protein.
     
 0.973
A0A1D6KX35
Ornithine aminotransferase.
    
 0.962
Cl4656_1
Hydrolase, carbon-nitrogen family.
    
 0.926
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.