STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B6TRJ7_MAIZESplicing factor U2af small subunit A. (299 aa)    
Predicted Functional Partners:
A0A1D6F7Q3
Splicing factor U2af large subunit B.
   
 0.973
Pco074093
Splicing factor U2af large subunit A.
   
 0.973
B4FD21_MAIZE
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.973
A0A1D6PJM8
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.972
Umc2567
Splicing factor U2af small subunit A.
  
  
 
0.901
A0A1D6MXH1
Splicing factor U2af small subunit A.
  
  
 
0.900
B4FAF4_MAIZE
Splicing factor U2af small subunit A.
  
  
 
0.900
K7V1E2_MAIZE
Splicing factor U2af subunit isoform 1.
  
  
 
0.900
A0A1D6F7N0
Splicing factor U2af large subunit A.
   
 0.879
B6TDD4_MAIZE
50S ribosomal protein L34.
      
 0.779
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.