STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0PE92_MAIZEE3 ubiquitin-protein ligase ATL41. (237 aa)    
Predicted Functional Partners:
A0A1D6I6V9
E3 ubiquitin-protein ligase UPL5.
    
 0.786
C4J431_MAIZE
E3 ubiquitin-protein ligase UPL5.
    
 0.786
B4FHN9_MAIZE
Cytochrome P450 71B10; Belongs to the cytochrome P450 family.
      
 0.609
A0A1D6KN59
Myb transcription factor38.
      
 0.551
TCP5
Transcription factor TCP2.
      
 0.551
MYB38_MAIZE
Myb-related protein Zm38; Transcription factor that regulates negatively genes involved in anthocyanin biosynthesis.
      
 0.502
B4FHR2_MAIZE
Protein SRG1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.501
C0P588_MAIZE
Transcription factor TCP18.
      
 0.499
A0A1D6ML20
RING/U-box superfamily protein.
  
     0.440
A0A1D6K7W3
Methylsterol monooxygenase 1-2; Belongs to the sterol desaturase family.
      
 0.428
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.