STRINGSTRING
Zm.20661 protein (Zea mays) - STRING interaction network
"Zm.20661" - Hypothetical protein LOC100278670 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.20661Hypothetical protein LOC100278670 (595 aa)    
Predicted Functional Partners:
GRMZM2G006452_P01
Structural maintenance of chromosomes protein 2 (545 aa)
     
        0.613
Zm.37432
Uncharacterized protein (450 aa)
     
   
  0.559
RAD51A
DNA repair protein RAD51 homolog A (Rad51-like protein A)(RAD51A)(ZmRAD51a); Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (340 aa)
     
   
  0.538
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
     
        0.504
Zm.31766
Putative uncharacterized protein (186 aa)
     
   
  0.475
Zm.13201
LOC100285210 (523 aa)
     
        0.472
GRMZM2G470438_P02
Hypothetical protein LOC100273582 ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (915 aa)
     
   
  0.471
Zm.82140
Putative uncharacterized protein (904 aa)
     
        0.464
Zm.50682
Hypothetical protein LOC100274706 (750 aa)
     
   
  0.459
Zm.155603
Uncharacterized LOC100280338 (1960 aa)
     
        0.455
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]