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mTRF1 protein (Zea mays) - STRING interaction network
"mTRF1" - Putative mitochondrial transcription termination factor family protein isoform 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mTRF1Putative mitochondrial transcription termination factor family protein isoform 1; Putative mitochondrial transcription termination factor family protein isoform 2; Uncharacterized protein (489 aa)    
Predicted Functional Partners:
GRMZM2G450863_P01
Uncharacterized protein (1482 aa)
     
      0.671
GRMZM2G088348_P01
annotation not available (347 aa)
     
      0.671
mterf7
annotation not available (118 aa)
           
  0.650
mTRF12
mTERF transcription factor; mTERF family protein (574 aa)
           
  0.650
mterf10
Transcription termination factor MTERF15 mitochondrial (346 aa)
           
  0.597
pco148683
50S ribosomal protein L4 (293 aa)
     
      0.573
100191385
Pentatricopeptide repeat53 (716 aa)
     
 
  0.570
pco138567b
30S ribosomal protein S1 (401 aa)
     
      0.558
100382451
30S ribosomal protein S6 alpha chloroplastic (222 aa)
     
      0.551
100193065
Putative zinc metalloprotease EGY2 chloroplastic (549 aa)
     
        0.544
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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