STRINGSTRING
knox3 protein (Zea mays) - STRING interaction network
"knox3" - KNOX1 domain containing protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
knox3KNOX1 domain containing protein (193 aa)    
Predicted Functional Partners:
Zm.118235
LOC100284083 (314 aa)
           
  0.721
gpm119
Plastid-lipid-associated protein 2 (LOC100284078), mRNA (318 aa)
           
  0.721
KNOX6
Homeobox protein knotted-1-like 7 Fragment (310 aa)
           
  0.720
KNOX2
Homeobox protein knotted-1-like 2 Fragment (316 aa)
           
  0.720
GRMZM2G302905_P01
Annotation not available (642 aa)
       
 
  0.625
knox7
Homeobox protein knotted-1-like 7 Fragment (363 aa)
           
  0.623
KNOX1
Homeobox protein knotted-1-like 1 Fragment (310 aa)
           
  0.622
hda101
Probable histone deacetylase 19 (EC 3.5.1.98)(RPD3 homolog); Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity) (517 aa)
       
  0.618
GRMZM2G095389_P01
Uncharacterized protein (580 aa)
     
 
  0.611
HOX1A
Putative uncharacterized protein ; Interacts with the shrunken (SHR) 26 bp feedback control element (442 aa)
           
  0.569
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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