STRINGSTRING
pco131508b protein (Zea mays) - STRING interaction network
"pco131508b" - LOC100282413 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco131508bLOC100282413 (332 aa)    
Predicted Functional Partners:
Zm.19254
Hypothetical protein LOC100191179 (455 aa)
     
 
  0.896
pco061228
LOC100282126 (94 aa)
       
      0.590
GRMZM2G047372_P01
Hypothetical protein LOC100382332 (199 aa)
       
      0.581
Zm.72745
Fb27 (201 aa)
       
      0.581
gpm370
Hypothetical protein LOC100274407 (1052 aa)
   
   
  0.537
GRMZM2G179045_P01
Hypothetical protein LOC100381799 (231 aa)
 
 
  0.535
GRMZM2G367026_P01
Hypothetical protein LOC100382013 (822 aa)
              0.528
GRMZM2G115442_P01
LOC100286139 (319 aa)
 
 
  0.526
Zm.10767
Short-chain dehydrogenase/reductase SDR (341 aa)
 
 
  0.521
IDP610
Hypothetical protein LOC100273624 (263 aa)
 
 
  0.512
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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