STRINGSTRING
Ra1 protein (Zea mays) - STRING interaction network
"Ra1" - Hypothetical protein LOC100276104 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ra1Hypothetical protein LOC100276104 (175 aa)    
Predicted Functional Partners:
ra2
Ramosa 2 (261 aa)
           
  0.830
BA1
Barren stalk1 (219 aa)
           
  0.721
rel2
Hypothetical protein LOC100381576 (1141 aa)
           
  0.721
ra3
Ramosa3 ; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (366 aa)
           
  0.721
bd1
Branched silkless1 (315 aa)
           
  0.719
bif2
Uncharacterized protein (460 aa)
           
  0.716
TB1
Transcription factor TEOSINTE BRANCHED 1 ; Transcription factor. Involved in apical dominance. Represses the growth of axillary organs (e.g. lateral branches), but enables the formation of female inflorescences. Regulates the number and length of axillary branches (376 aa)
           
  0.711
ids1
Indeterminate spikelet1 (433 aa)
           
  0.710
ts4
Uncharacterized protein (108 aa)
           
  0.710
TD1
Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1; Receptor-like kinase protein that regulates meristem size during inflorescence and flower development. Promotes vegetative meristem growth and restricts inflorescence and floral meristem growth. Based on additive and synergistic phenotypes of double mutants, it is probable that unlike CLV1 and CLV2 in A.thaliana, TD1 and FAE2 do not function exclusively in a single pathway. However, KN-1 and TD1 do function in a linear pathway to maintain vegetative meristem homeostasis, but they may interact with different partners [...] (996 aa)
           
  0.667
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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