STRINGSTRING
Ij protein (Zea mays) - STRING interaction network
"Ij" - Protein Iojap in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IjProtein Iojap ; May be a ribosome silencing factor (Potential). Involved in plastid biogenesis. Plastids affected by a mutation in Iojap lose the ability to perform translation and lack plastid ribosomes (228 aa)    
Predicted Functional Partners:
Zm.80133
Putative uncharacterized protein (717 aa)
         
  0.746
Zm.4019
LOC100280719 (731 aa)
         
  0.746
AC203754.4_FGP008
Uncharacterized protein (545 aa)
         
  0.746
RpoT
RNA polymerase2 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (952 aa)
     
   
  0.725
Zm.76158
Ribonucleoprotein A (268 aa)
   
 
    0.680
GRMZM2G049398_P01
Hypothetical protein LOC100191814 (119 aa)
     
      0.660
TIDP3048
Mitochondrial ribosomal protein L43 (119 aa)
     
      0.660
GRMZM2G101494_P01
Annotation not available (91 aa)
       
      0.651
GRMZM2G048557_P01
39S ribosomal protein L47 (138 aa)
       
      0.651
GRMZM2G026614_P03
Hypothetical protein LOC100272318 (385 aa)
   
 
  0.643
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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