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GRMZM2G005260_P04 protein (Zea mays) - STRING interaction network
"GRMZM2G005260_P04" - CMV 1a interacting protein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G005260_P04CMV 1a interacting protein 1 (359 aa)    
Predicted Functional Partners:
Zm.15058
LOC100285398 (290 aa)
   
        0.509
GRMZM5G864166_P01
Hypothetical protein LOC100217065 (426 aa)
   
     
  0.497
Zm.21535
Hypothetical protein LOC100277108 (238 aa)
   
          0.493
pco092382
LOC100282845 (405 aa)
   
        0.459
Zm.117930
Hypothetical protein LOC100279820 (582 aa)
   
        0.459
APE1
Hypothetical protein LOC100191267 (261 aa)
   
        0.455
pco136292
LOC100282910 (148 aa)
   
        0.451
GRMZM2G113349_P01
Hypothetical protein LOC100191684 (373 aa)
   
        0.451
GRMZM2G175562_P02
Hypothetical protein LOC100272890 (329 aa)
   
        0.445
GRMZM2G362949_P04
Hypothetical protein LOC100273303 (428 aa)
   
          0.437
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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