STRINGSTRING
Zm.140206 protein (Zea mays) - STRING interaction network
"Zm.140206" - Nucleic acid binding proteinPutative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.140206Nucleic acid binding proteinPutative uncharacterized protein ; (297 aa)    
Predicted Functional Partners:
Zm.58717
pre-mRNA-processing factor 6-like (956 aa)
     
  0.977
Zm.36968
Uncharacterized protein (962 aa)
     
  0.977
AC193382.3_FGP002
Annotation not available (109 aa)
     
  0.977
Zm.28923
Uncharacterized protein (430 aa)
     
 
  0.941
ms45
Hypothetical protein LOC100273898 (323 aa)
     
  0.879
GRMZM2G100620_P01
Hypothetical protein LOC100272589 (317 aa)
     
  0.879
GRMZM2G375172_P01
Hypothetical protein LOC100217215 (861 aa)
       
  0.746
GRMZM2G126141_P01
Hypothetical protein LOC100279564 (376 aa)
       
  0.746
Zm.118411
Splicing factor 45 (384 aa)
     
 
  0.716
cl549_1b
LOC100283416 (382 aa)
     
 
  0.716
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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