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STRINGSTRING
cl52_1b protein (Zea mays) - STRING interaction network
"cl52_1b" - S-adenosyl-L-methionine-dependent methyltransferase superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl52_1bS-adenosyl-L-methionine-dependent methyltransferase superfamily protein (357 aa)    
Predicted Functional Partners:
ho3
Heme oxygenase3 (242 aa)
     
   
  0.742
HO-1
Elongated mesocotyl2; Heme oxygenase 1; Uncharacterized protein (285 aa)
     
   
  0.742
ho2
Heme oxygenase2 (281 aa)
     
   
  0.742
100272729
Putative inactive heme oxygenase 2 chloroplastic (316 aa)
     
   
  0.742
100282599
Transcriptional coactivator/pterin dehydratase (230 aa)
           
  0.656
CFM3
CRM-domain containing factor CFM3, chloroplastic/mitochondrial; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2. May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
     
        0.605
GRMZM2G470723_P01
Uncharacterized protein (263 aa)
     
        0.604
GRMZM2G444715_P01
annotation not available (428 aa)
     
        0.604
100501901
annotation not available (502 aa)
     
        0.604
GRMZM2G399778_P01
annotation not available (266 aa)
     
        0.604
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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