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STRINGSTRING
GRMZM2G005980_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G005980_P01" - DNA-binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G005980_P01DNA-binding protein (622 aa)    
Predicted Functional Partners:
100191510
Periodic tryptophan protein 2 (885 aa)
     
        0.888
gpm647
S-adenosyl-L-methionine-dependent methyltransferase superfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (1022 aa)
     
   
  0.885
100284384
50S ribosomal protein L17; Uncharacterized protein ; Belongs to the bacterial ribosomal protein bL17 family (161 aa)
     
        0.856
100274849
Pentatricopeptide repeat-containing protein PNM1 mitochondrial (484 aa)
     
   
  0.836
100285351
Mitochondrial import inner membrane translocase subunit Tim13; Uncharacterized protein ; Belongs to the small Tim family (87 aa)
     
        0.833
100273091
Ubiquitin carboxyl-terminal hydrolase family protein (416 aa)
     
        0.831
100283150
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (188 aa)
     
        0.830
GRMZM2G099810_P01
annotation not available (372 aa)
     
        0.830
100193563
U3 small nucleolar RNA-associated protein 18-like protein (556 aa)
     
        0.830
100285900
Mitochondrial import inner membrane translocase subunit Tim10 (83 aa)
     
        0.802
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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