STRINGSTRING
ARF28 protein (Zea mays) - STRING interaction network
"ARF28" - Hypothetical protein LOC100383196 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF28Hypothetical protein LOC100383196 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (826 aa)    
Predicted Functional Partners:
AUX27
Hypothetical protein LOC100273242 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (294 aa)
       
 
  0.955
GRMZM2G141810_P01
Hypothetical protein LOC100193435 (435 aa)
           
  0.721
Zm.128317
Disulfide oxidoreductase/ monooxygenase/ oxidoreductase (523 aa)
           
  0.721
Zm.131395
Disulfide oxidoreductase/ monooxygenase/ oxidoreductase (422 aa)
           
  0.720
spi1
Sparse inflorescence 1 (216 aa)
           
  0.560
umc2319
Hypothetical protein LOC100272716 (431 aa)
           
  0.527
yuc
Flavin monooxygenase (399 aa)
           
  0.521
vt2
L-tryptophan--pyruvate aminotransferase 1-like (530 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]