STRINGSTRING
Zm.5548 protein (Zea mays) - STRING interaction network
"Zm.5548" - Putative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5548Putative uncharacterized protein (658 aa)    
Predicted Functional Partners:
GRMZM2G000566_P01
Hypothetical protein LOC100384546 (902 aa)
 
          0.708
cl31389_1
Hypothetical protein LOC100279496 (510 aa)
 
          0.708
GRMZM2G058739_P01
Hypothetical protein LOC100279496 (510 aa)
 
          0.708
Zm.94757
Uncharacterized LOC103638805 (483 aa)
 
          0.706
GRMZM2G146192_P01
Hypothetical protein LOC100279508 (794 aa)
   
   
  0.580
Zm.7061
Putative uncharacterized protein (500 aa)
           
  0.528
Zm.40564
Hypothetical protein LOC100279996 (773 aa)
   
     
  0.518
GRMZM2G007347_P01
Glycosyl hydrolase, family 43 protein (467 aa)
   
     
  0.481
GRMZM2G058685_P01
Putative uncharacterized protein (262 aa)
   
          0.478
GRMZM2G081729_P01
Uncharacterized LOC103639465 (467 aa)
   
     
  0.477
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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